PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G111800.1
Common NamePHAVU_001G111800g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 279aa    MW: 30646.1 Da    PI: 6.529
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G111800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-183685255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Phvul.001G111800.1 36 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 85
                        799******.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.5853693IPR001471AP2/ERF domain
PfamPF008475.4E-133685IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-193693IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.0E-283693IPR001471AP2/ERF domain
SMARTSM003801.6E-353699IPR001471AP2/ERF domain
CDDcd000184.86E-323692No hitNo description
PRINTSPR003679.5E-83748IPR001471AP2/ERF domain
PRINTSPR003679.5E-85975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MEIQFQQPNL QHQKSGIAIT KGGKLKGRSR SNNTNKFVGV RQRPSGRWVA EIKDTTQKIR  60
MWLGTFETAE EAARAYDEAA CLLRGSNTRT NFITHVSLDS PLASRIRNLL NNKKGMKKQE  120
DANANNAPAP RVSSTSTAST SISTTTSAIS NSNNGNGNND KSLSTVTPQS SNLFDDAYKP  180
DLSNCREDFG SGQQSNASWG FGAVFDRFPI AQILDVPKID DCLTDTADLE LSEFERMKVE  240
RQISASLYAI NGVQEYMETV QDSSETLWDL PPLCSLFC*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007161956.10.0hypothetical protein PHAVU_001G111800g
TrEMBLV7CXD80.0V7CXD8_PHAVU; Uncharacterized protein
STRINGGLYMA19G29000.11e-158(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-30related to AP2 11